This directory contains example scripts and data files to perform various
common tasks with CYANA.


AnalyzeStructure.cya            Analyze a structure
CaAngleRestraints.cya           Angle restraints based on CA chemical shifts
CalcExecutable.cya              Macro as an executable shell script
DisulfideBonds.cya              Create restraints for disulfide bonds
GridSearch.cya                  Systematic local conformation analysis
Hbonds.cya                      Create restraints for hydrogen bonds
MergeRestraints.cya             Merge multiple restraints files
MigrateFromDyanaCyana1.cya      Migrate data from Cyana 1.x or Dyana
MigrateFromXplorCns.cya         Migrate data from Xplor or CNS
ModifyUpperLimits.cya           Modify upper distance limits
NoeStatisticsPlots.cya          NOE statistics and plots
PdbBmrbDeposit.cya              Prepare files for PDB and BMRB deposition
ProlineRestraints.cya           Create restraints to close flexible PRO rings
RamachandranRestraints.cya      Ramachandran plot and rotamer restraints
RenumberShiftsPeaks.cya         Renumber chemical shifts and peaks
Rmsd.cya                        Calculate RMSD values and mean structures
TalosAngleRestraints.cya        Angle restraints from the program TALOS
