Automated resonance assignment with FLYA (EMBO 2013)

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We want to determine the resonance assignments and the structure of a protein.

The protein sequence is stored in the file 'demo.seq'.

The following spectra have been measured:

  • [1H,13C]-HSQC, called 'C13H1' in FLYA
  • [1H,15N]-HSQC, called 'N15H1' in FLYA
  • HNCA
  • HN(CO)CA, called 'HN_CO_CA' in FLYA
  • HNCO
  • HN(CA)CO, called 'HN_CA_CO' in FLYA
  • CBCANH
  • CBCACONH
  • HBHACONH
  • HCCH-TOCSY, called 'HCCH24' in FLYA
  • HCCH-COSY, called 'HCCH7' in FLYA
  • C(CO)NH, called 'C_CO_NH' in FLYA
  • HC(CO)NH, called 'HC_CO_NH' in FLYA

Peak lists that have been prepared by automatic peak picking with the program NMRView are stored in files XXX.peaks, where XXX denotes the FLYA spectrum type.

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